Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015942738.1_cds_XP_016486100.1_76968
CDS Infomation

[gene=LOC107806462] [db_xref=GeneID:107806462] [protein=naringenin,2-oxoglutarate 3-dioxygenase-like] [protein_id=XP_016486100.1] [location=complement(join(9390..9701,9799..10227,10696..11064))] [gbkey=CDS]
Sequence

ATGGCACCTTCGACATTGACAGCTCTAGCAGAGGAAAAGACACTTCAAACAAGTTTCATA
AGAGATGAAGATGAGCGACCAAAAGTGGCGTACAACCAATTCAGCGATGAGATTCCGATC
ATATCGTTGAAGGGTATTGATGATGAGGGTGGAATTAATGGAAGAAGAGGTGAAATATGT
GAAAAGATTGTCAAGGCATGTGAAGATTGGGGCGTTTTCCAGGTAGTTGATCATGGTGTT
GATGCTCAACTTATCTCACAAATGACAACTCTCGCTAAACAATTCTTCGCTTTGCCTGCT
GAGGAAAAGCTACGGTTTGACATGTCGGGTGGCAAGAAAGGTGGCTTCATTGTCTCTAGC
CATCTACAGGGTGAAGTGGTCCAAGATTGGCGTGAAATAGTGACCTACTTCTCATACCCA
ATTCGGGCTAGAGACTACTCTAGATGGCCAGACAAACCAGAGGGATGGATAGATGTGACT
CAAAAGTACAGTGAAAAGTTAATGGAGTTGGCTTGCAAATTATTGGAAGTACTATCAGAG
GCTATGGGCTTAGAGAAGGAGGCCTTAACCAAGGCATGTGTGGATATGGACCAAAAAGTG
GTTGTCAATTTTTACCCAAAGTGTCCACAGCCTGACCTTACCCTTGGGCTGAAACGACAC
ACTGATCCAGGAACCATCACCCTCTTGTTACAAGACCAAGTTGGTGGGCTTCAAGCCACT
AAAGATAATGGCAAAACTTGGATTACTGTTCAGCCCGTTGTTGGCGCTTTTGTTGTCAAT
CTTGGTGACCATGGTCATTTTTTGAGCAATGGAAGGTTTAAGAACGCTGATCATCAAGCA
GTGGTGAACTCGAATAGCAGCAGATTATCGATAGCTACGTTTCAGAATCCAGCACCAGAG
GCAATAGTGTATCCTTTGAAAATTAGGGAAGGAGAGAAGGCAGTGATGGACGAGCCCGTA
GCATTTGCAGAAATGTATAGGAGGAAAATGAGTAAGGACCTTGAGCTTGCTAGGCTCAAG
AAACTAGCCAAGGAGCAGCAAATACAAGCTGAAGAAGCTGCTGAGAAGGCCAAGTCGGAA
ACCAAGCCTATTGATGAAATTCTTGCTTAA

Peptide Sequence

PEP ID

XP_016486100.1
PEP Infomation

PREDICTED: naringenin,2-oxoglutarate 3-dioxygenase-like [Nicotiana tabacum]
Sequence

MAPSTLTALAEEKTLQTSFIRDEDERPKVAYNQFSDEIPIISLKGIDDEGGINGRRGEIC
EKIVKACEDWGVFQVVDHGVDAQLISQMTTLAKQFFALPAEEKLRFDMSGGKKGGFIVSS
HLQGEVVQDWREIVTYFSYPIRARDYSRWPDKPEGWIDVTQKYSEKLMELACKLLEVLSE
AMGLEKEALTKACVDMDQKVVVNFYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQAT
KDNGKTWITVQPVVGAFVVNLGDHGHFLSNGRFKNADHQAVVNSNSSRLSIATFQNPAPE
AIVYPLKIREGEKAVMDEPVAFAEMYRRKMSKDLELARLKKLAKEQQIQAEEAAEKAKSE
TKPIDEILA

Transcript Sequence

Gene sequence data has not been registered.